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RNA Molecule Has Big Implications For Life's Origins Print E-mail
SciMed - Biology
TS-Si News Service   
Sunday, 28 February 2010 16:00

RNA Molecule Has Big Implications For Life's Origins

Boulder, CO, USA. A science team has created an extremely small RNA molecule that can catalyze a key reaction needed to synthesize proteins, the building blocks of life. The molecule is the smallest RNA enzyme ever known to perform a cellular chemical reaction.

The new research builds on work by Tom Cech, a Nobel laureate and professor of chemistry and biochemistry at the University of Colorado at Boulder, and Professor Norman Pace of the CU molecular, cellular and developmental biology department (MCDB). They independently discovered that RNA can act as an enzyme, carrying out cellular-level chemical reactions.

Because proteins are complex, one vexing question is where the first proteins came from. Tom Blumenthal, the MCDB chair says "It now appears that the first catalytic macromolecules could have been RNA molecules, since they are somewhat simpler, were likely to exist early in the formation of the first life forms, and are capable of catalyzing chemical reactions without proteins being present."

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The original pioneering work has been carried further by the research team. Cellular RNA can have hundreds or thousands of its basic structural units, called nucleotides. The research team focused on a ribozyme — a form of RNA that can catalyze chemical reactions — with only five nucleotides.

Michael Yarus

Professor Michael Yarus of the MCDB at CU was the project lead on the new work. Rebecca Turk, a graduate student at was the lead author of a paper in the Proceedings of the National Academy of Sciences (PNAS) with Yarus and research associate Nataliya Chumachenko.

In this paper the Michael Yarus group reports on the discovery that even an extremely tiny RNA can by itself catalyze a key reaction that would be needed to synthesize proteins. This is an unexpected finding since nobody expected an RNA molecule this small and simple to be able to do such a complicated thing.

The finding adds weight to the RNA World hypothesis, which proposes that life on Earth evolved from early forms of RNA. Yarus has been one of the strongest proponents of this idea, with some of the strongest evidence over the past two decades emerging from his lab.

Yarus noted that the RNA World hypothesis was complicated by the fact that RNA molecules are hard to make. "This work shows that RNA enzymes could have been far smaller, and therefore far easier to make under primitive conditions, than anyone has expected."

If very simple RNA molecules such as the product of the Yarus lab could have accelerated chemical reactions in Earth's primordial stew, the chances are much greater that RNA could direct and accelerate biochemical reactions under primitive conditions.

Before the advent of RNA, most biologists believe, there was a simpler world of chemical replicators that could only make more of themselves, given the raw materials of the time, Yarus said.

"If there exists that kind of mini-catalyst, a 'sister' to the one we describe, the world of the replicators would also jump a long step closer and we could really feel we were closing in on the first things on Earth that could undergo Darwinian evolution," Yarus said.

"In other words, we may have taken a substantial step toward the very origin of Earthly life," he said. "However, keep well in mind that the tiny replicator has not been found, and that its existence will be decided by experiments not yet done, perhaps not yet imagined."

"Dr. Yarus has brought an innovative approach to bear on the key question of how complex processes originated," said Michael Bender, a biologist who oversees protein synthesis grants for the National Institute of General Medical Sciences at the National Institutes of Health (NIH).

"By showing that a tiny segment of RNA can perform a key step of protein synthesis, this study has provided evidence that fundamental, protein-mediated cellular processes may have arisen from RNA-based mechanisms."

CitationMichael Yarus' work is supported by a grant from the National Institutes of Health (NIH). In 2008 he was named a fellow of the American Association for the Advancement of Science (AAAS) for meritorious efforts to advance science or its applications.
CitationMultiple translational products from a five- nucleotide ribozyme. Rebecca M. Turk, Nataliya V. Chumachenko, and Michael Yarus. Proceedings of the National Academy of Sciences 2010; ePub ahead of print. doi:10.1073/pnas.0912895107
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Abstract

An indispensable step in protein biosynthesis is the 2'(3') aminoacylation of tRNA by aminoacyl-tRNA synthetases. Here we show that a similar activity exists in a tiny, 5-nt-long RNA enzyme with a 3-nt active center. The small ribozyme initially trans-phenylalanylates a partially complementary 4-nt RNA selectively at its terminal 2'-ribose hydroxyl using PheAMP, the natural form for activated amino acid. The initial 2' Phe-RNA product can be elaborated into multiple peptidyl-RNAs. Reactions do not require divalent cations, and have limited dependence on monovalent cations. Small size and minimal requirements for regiospecific translational activity strongly support the hypothesis that minuscule RNA enzymes participated in early forms of translation.

Keywords: aminoacyl-rna, enzyme, evolution, peptidyl-rna, rna.

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Last Updated on Saturday, 27 February 2010 23:44